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CLC RNA Workbench

Gives the user easy access to a range of complex algorithms and options.

RNA secondary structures ... algorithms. CLC RNA Workbench is ... . The CLC RNA Workbench gives

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Illumina GenomeStudio RNA Sequencing Module
 Illumina  9  Commercial
The RNA Sequencing Module supports data analysis for transcriptome sequencing.
RNA-Seq Tools
 Gene Codes Corporation  68  Freeware
RNA-Seq Tools can analyze your RNA-Seq data for Differential Expression.
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DNASIS MAX
6  MiraiBio Group  100  Demo
It is a bioinformatics software for DNA/RNA/Amino Acid sequence analysis.
BioEdit
797  Tom Hall  27,303  Freeware
View and manipulate biological sequences, and create plasmid vector graphics.
TopHAT
 University of Maryland,Center for Bioinformatics and Computational Biology  Freeware
TopHat is a fast splice junction mapper for RNA-Seq reads.
CLC Sequence Viewer
26  QIAGEN  1,879  Freeware
Creates a high number of bioinformatics analyses, with graphical shown results.
Yass
 Bonsai bioinformatics  20  Freeware
A genomic similarity search tool, for nucleic sequences in plain text format.
USCloning
51  Manuel Veiga  4  Freeware
The program is designed for Molecular Biology/Genetic Engineering students.
Additional titles, containing search rna
CrossLink
 Daniel Huson's Lab, Tuebingen University  14  Freeware
CrossLink is a tool for the exploration of relationships between RNA sequences.
RNAstructure
3  David H. Mathews  217  Freeware
A program for RNA and DNA secondary structure prediction and analysis.
CLC Main Workbench
7  CLC bio, a QIAGEN Company.  1,087  Shareware
CLC Main Workbench can be used for DNA, RNA, and protein sequence data analysis.
Bio-Rad Laboratories Experion
1  Bio-Rad Laboratories  38  Demo
Experion software is a user-friendly interface for protein, RNA, or DNA analysis.
LabChip GX
1  PerkinElmer Inc.  41  Freeware
It is designed for DNA smear analysis, RNA and gDNA integrity analysis.
4Sale
 Department of Bioinformatics, Biocenter, University of Würzburg, Germany  1  Freeware
Toolbox for RNA analysis based on sequence and secondary structure information.
pknotsRG
 Peter Steffen  4  Freeware
pknotsRG is a tool for folding RNA secondary structures.
VARNA GUI
1  Kevin Darty, Alain Denise and Yann Ponty  Freeware
VARNA is Java Applet dedicated to drawing the secondary structure of RNA.
CATUI
 Gutell Lab  1  Freeware
Visualization and manipulation of RNA sequences and structures.
QIAxcel ScreenGel
 QIAGEN  49  Commercial
It is a program designed for analyzing DNA, RNA and proteins.
Non-reviewed